Boris DELAHAIE
Post-doctorant
CEFE/CNRS
Campus du CNRS
1919, route de Mende
34293 Montpellier 5
Tél : +33/0 4 67 61 32 17
Fax : +33/0 4 67 61 33 36
Bref CV
- Postdoc, 2015 - present
CNRS CEFE UMR 5175, Montpellier, France.
Supervision: Anne Charmantier and Céline Teplitsky.
Wild quantitative genetics in Blue Tit (Cyanistes caereleus)
- PhD, 2011 – 2015
Laboratoire Evolution et Diversité Biologique, University Paul Sabatier, Toulouse, France.
Supervision : Christophe Thébaud and Borja Milá.
Speciation, environmental gradients and hybrid zones : the case of the Mascarene grey White-eye Zosterops borbonicus
Thèmes de recherche
During my PhD, I worked on the diversification of an island bird : the Mascarene Grey White-eye (Zosterops borbonicus). This species, endemic to the island of Réunion (Indian Ocean), represents an extreme case of within-island diversification. I used population genetic tools and hybrid zone theory in order to decipher the relative roles of historical, environmental and neutral factors in the emergence and maintenance of this diversity. I was particularly interested in the dynamics of the different hybrid zones which are found between each of the geographical colour form of the species.
For more information, have a look at the project webpage !
For my postdoctoral project, I am working in quantitative genetics on a long-term dataset collected in wild populations of Blue Tit (Cyanistes caereleus) in Southern France and Corsica. I aim to understand how the interplay between selection, migration and G matrix affect differentiation among populations. I am using different approaches such as multivariate QST – FST comparison and comparison of genetic (co)variances and heritabilities for various traits (morphology and life history traits) across populations experiencing contrasted environmental conditions.
Publications
- Peer-reviewed publications
Bourgeois YX, Bertrand JA, Delahaie B, Cornuault J, Duval T, Milá B, Thébaud C. 2016. Candidate gene analysis suggests untapped genetic complexity in melanin-based pigmentation in Birds. Journal of Heredity, 107, 4: 327-335.
Bertrand JAM.*, Delahaie B*, Bourgeois YXC, Duval T, García-Jiménez R, Cornuault J, Pujol B, Thébaud C, Milá B. 2016. The role of natural selection and historical factors in driving population differentiation along an elevational gradient in an island passerine bird. Journal of Evolutionary Biology, 29, 4: 824-836. *equal contribution
Besnard G., Bertrand J.A.M., Delahaie B., Bourgeois Y.X.C., Lhuilier E., Thébaud C. (2015) Valuing museum specimens: high througput DNA sequencing on historical collections of New Guinea crowned pigeons (Goura). Biological Journal of the Linnean Society, 117, 1: 71-82.
Cornuault J.*, Delahaie B.*, Bertrand J.AM., Bourgeois Y.X.C., Milá B., Heeb P., Thébaud C. (2015) Morphological and plumage colour variation in the Réunion grey white-eye (Aves: Zosterops borbonicus): assessing the role of selection. Biological Journal of the Linnean Society, 114 (2), 459-473. *equal contribution
Bertrand J., Bourgeois Y., Delahaie B., Duval T., García-Jiménez R., Cornuault J., Heeb P., Milá B., Pujol B., Thébaud C. (2014) Extremely reduced dispersal and gene flow in an island bird. Heredity, 112 : 190-196.
Bourgeois, Y., Lhuilier E., Cézard T., Bertrand J., Delahaie B., Cornuault J., Duval T., Bouchez O., Mila B., Thébaud C. (2013) Mass production of SNP markers in a non model passerine bird through RAD seuquencing and contig mapping to the zebra finch genome. Molecular Ecology Resources, 13 (5) : 899-907.
- Non Peer-reviewed publications
Communier F., Delahaie B., Courmont L., Delattre J.-C., Fiquet P., Gilot F., Giraudon Q., Gonin J., Le Nevé A. (2013) « Migration prénuptiale du Phagmite aquatique Acrocephalus paludicola dans les Pyrénées-Orientales : enjeux et conservation. La Mélano, 13 : 13-19.
- Popular science
Bertrand J., Delahaie B., Bourgeois Y., Thébaud C. (2013) Comment naissent de nouvelles espèces ? Le cas du zostérops gris de La Réunion. L’Oiseau magazine, 113 : 64-72.
Liens
Gregory Mollot EN
Grégory MOLLOT
Post Doctoral Fellow
CEFE/CNRS
Campus du CNRS
1919, route de Mende
34293 Montpellier 5
Tél : +33/0 4 67 61 .. ..
Fax : +33/0 4 67 61 33 36
Research topics
My work is focused on food web studies. The theory of food web helps to explain energy and matter fluxes through trophic interactions (feeding relationship) that exist between species in an ecosystem. Food webs are unidirectional, i.e. the flow occurs only in one direction : species A feed on species B, in this simple scheme, A is the consumer and B is the resource. The assembly of interactions by considering overall species in the system is the food web. The study of ecological systems through the food web theory allows the use of statistical tools developed to complex network analyses, for instance, structural analysis of a food web can provide information on functioning and stability (resilience/persistence). This approach can be very interesting to study the effect of a disturbance, as a biological invasion or extinction of species, on the stability of the food web.
The main difficulty faced with this approach is to reach an accurate description of the food web structure. In fact, food webs typically consists of hundreds or even thousands of interactions between species, and such set of interactions is dynamically altered in time and space. The construction of a food web by traditional methods (observation, bibliographic data compilation, etc…) can be very time-consuming and unsuitable. During my PhD, I worked on a DNA metabarcoding approach to effectively characterize the diet of arthropods, and I was able to reconstruct the food web of a banana plantation in the Caribbean. The approach is divided into four tasks:
- Construction of a reference library with DNA barcodes of all species present in the system
- Sampling and dissection of the gut content of each sampled specimen, DNA extraction, PCR and high-throughput sequencing
- Identification of sequences by bioinformatics analysis (alignment of each raw sequence from the sequencing with all sequences included in the reference library)
- The result is a binary interaction matrix (presence / absence) or semi-quantitative (for a given consumer species: proportion of individuals in which we detected the DNA of a given resource) that represents the consumer / resource interactions.
In the case of the Caribbean banana plantation, the approach identified three species of predators consuming the main pest of bananas (the banana weevil). This also helped to highlight the effect of the addition of a cover crop in a banana plantation on the food web structure, compared to a banana plantation on a bare soil: significant diet change of generalists predators to feed on alternative prey supported by the cover crop (here, Diptera). The result challenged our expectations, the underlying hypothesis being that the cover crop provides alternative prey (such as Diptera), which will allow an increase of predators abundances and therefore increased predation rate on the pest through apparent competition mechanism. Although we have observed the presence of alternative prey and increased predators’ abundances, we did not observe an increase of predation rate on the pest. Probably the high abundance of alternative prey and the easy-access to this food skewed the apparent competition in favour of alternative prey.
I am currently working on a meta-analysis (CESAB-FRB funding), which aims to highlight the effect of biological invasions on the food web structure and stability. This work will contribute to the design of a prediction model of biological invasions. (Supervisors : Patrice David & François Massol)
Brief CV
2014-2017 : Postdoc CNRS-CEFE (Montpellier), meta-analysis of the effect of biological invasions on food web stability.
2013-2014 : Postdoc INRA-PSH (Avignon), arthropods movement tracking with ovalbumin (white eggs powder) and ELISA immunoassay in apple orchards
2009-2012 : PhD CIRAD-PRAM Banana, plantain and pineapple cropping systems (Martinique, FWI), DNA metabarcoding and structural analysis of a banana food web
Publications
Mollot G, Duyck PF, Borowiec N, Glennac S, Quilici S (2015) Life-history traits of Encarsia guadeloupae, a natural enemy of the invasive spiralling whitefly Aleurodicus dispersus. Journal of Applied Entomology (in revision)
Mollot G, Duyck PF, Lefeuvre P, Lescourret F, Martin JF, Piry S, Canard E, Tixier P (2014) Cover cropping alters the diet of arthropods in a banana plantation: a metabarcoding approach. PLoS One e93740
Tixier P, Dagneaux D, Mollot G, Vinatier F, Duyck PF (2013) Weeds mediate the level of intraguild predation in arthropod food webs. Journal of Applied Entomology 137 (9) : 702-710
Tixier P, Peyrard N, Aubertot JN, Gaba S, Radoszycki J, Caron-Lormier G, Vinatier F, Mollot G, Sabbadin R (2013) Modelling interaction networks for enhanced ecosystem services in agroecosystems. Advances in Ecological Research 49 : 437-480
Mollot G, Tixier P, Lescourret F, Quilici S, Duyck PF (2012) New primary resource increase predation on a pest in a banana agroecosystem. Agricultural & Forest Entomology 14 (3) : 317-323
Projets actuellement financés dans l'équipe
Projets actuellement financés dans l'équipe
Sont recensés ici les projets majeurs dont un membre de l'équipe est un des coordinateurs principaux.
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ERC (Europe)
RegEvol: The evolution of cis and transregulators in eukaryotes (2023-2028) porté par Thomas Lenormand (en collaboration avec Christoph Haag et Aline Muyle).
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RIA (Europe)
IMPTOX: An innovative analytical platform to investigate the effect and toxicity of micro and nano plastics combined with environmental contaminants on the risk of allergic disease in preclinical studies (2021-2025), avec Stéphanie Bedhomme comme partenaire (coordinatrice T. Cirkovic Velickovic, Université de Belgrade).
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ANR (France)
FRIDA: Fast Renewed Inbreeding Depression in Animals, porté par avec Patrice David (en collaboration avec Philippe Jarne et Aline Muyle).
IMPRINT: Genomic imprinting and separate sexes evolution, porté par Aline Muyle.
Supergene: Consequences of supergene evolution, porté par Mathieu Joron.
DivAlps: Diversification and adaptation along environmental gradients, avec Mathieu Joron comme partenaire (porteuse Laurence Després au LECA Grenoble).
MINIGAN: "MITo Nuclear Interactions and Gynodioecy in ANimals" 2019-2023, porté par avec Patrice David (Philippe Jarne comme responsable de WP)
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Others:
WATERISK : Enrichment of emerging antibiotic resistance of public health concern in the hydric environment: toward a genomic, phenotypic and evolutionary-based proxy of exposition risk in a territory (2023-2026), funded by ExposUM, avec Stéphanie Bedhomme comme partenaire (porté par Estelle Jumas-Bilak, Hydrosciences Montpellier).
Mommy knows best (Climate & Biodiversity initiative, Céline Teplitsky). Fondation BNP Paribas (France).
COMPLEXADAPT - ExpEvolOcc (2022-2025): coordinateur L-M Chevin. Biodivoc Consortium de la région Occitanie.
ODE : Suivis de communautés de mollusques et de crustacés dans les eaux douces de Martinique (2023-2024), porteur : P. Jarne ; P. David participant).
MICROVECT : Evaluating the impact of diet, microbiota and environmental factors on vectorial capacity of vectors of zoonotic diseases in Occitanie (2022-2024), porteur: B. Gourbal (Perpignan), P. Jarne et P. David, animateurs d’un axe de travail.
Anciens projets
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ERC (Europe)
FluctEvol: Fluctuating selection, evolution, and plasticity in random environments (2016-2021), Starting Grant, L-M Chevin.
HGTCodonUse: The evolutionary significance of synonymous variations: Can codon usage preferences drive the propagation of antibiotic resistance? (2016-2021), Consolidator Grant, S. Bedhomme.
Dynamics of eco-evolutionary systems (2018-2023), Consolidator grant, Patrik Nosil.
SHE: Multil-level Selection in a Heterogeneous Environment (2014-2019), Starting Grant, A. Charmantier.
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ANR (France)
CisTransEvol: The evolution of cis and transregulators in eukaryotes (2023) porté par Thomas Lenormand, partenaires Christoph Haag et Aline Muyle.
NGB: Biosurveillance Next-Gen des changements dans la structure et fonctionnement des écosystèmes (2016-2020), avec Patrice David et Philippe Jarne comme partenaires (portée par D Bohan, Inrae Dijon)
ContempEvol: Prédire l'évolution contemporaine et la persistance des populations en environnement changeant (2011-2015), L-M Chevin.
PEPS: Potentiel évolutif en populations sauvages (2012-2016), C. Teplitsky & A. Charmantier.
SilentAdapt: Adaptation à des doses de pesticides variables (2014-2018), T. Lenormand.
SENSHYBLE: Ecologie Sensorielle des Zones d'Hybridation en Environnement Lentique (2011-2015), P-A Crochet.
AFFAIRS: Adaptation of Fragmented Freshwater assemblages in Rapidly-changing environmentS (2012-2016), P. David.
ESHAP: Evolution of Self-fertilization in Hermaphrodites : an Animal Perspective (2013-2016), P. David.
Gabrielle DUBUC-MESSIER
Doctorant
CEFE/CNRS
Campus du CNRS
1919, route de Mende
34293 Montpellier 5
Tél : +33/0 4 67 61 32 11
Fax : +33/0 4 67 61 33 36
Thèmes de recherche
Hétérogénéité environnementale et évolution des différences de traits de personnalité chez la mésange bleue (Cyaniste caeruleus).
Je suis une doctorante encadrée par Anne Charmantier et Denis Réale (Université du Québec à Montréal). Mon projet de doctorat porte sur les causes écologiques et évolutives de la diversité des traits de personnalité au sein d’une espèce animale. J’étudie des populations sauvages de mésanges bleues (Cyanistes caeruleus) en Corse (France) qui occupent des habitats avec des conditions écologiques très différentes. Je souhaite déterminer si l’on retrouve différents traits de personnalité chez les oiseaux qui vivent dans différents types d’habitats, si ces différences ont une base génétique et si elles sont issues de la sélection naturelle. Finalement, j’aimerais déterminer s’il existe un lien entre la variabilité interindividuelle des traits de personnalité à l’intérieur même des populations et l’hétérogénéité des conditions écologiques à fine échelle spatiale.
Environmental heterogeneity and the evolution of personality traits in blue tits (Cyaniste caeruleus)
I’m a Ph.D student supervised by Anne Charmantier and Denis Réale (Université du Québec à Montréal). My project addresses the evolutionary and ecological causes of personality in wild animal populations. I am studying blue tit populations living in contrasting environmental conditions in Corsica (France). My goal is to determine is these populations are showing phenotypic differences in personality traits, if these differences reflect genetic differences and if they are the product of natural selection. Finally, I hope to determine if phenotypic variability in a given population is related to fine scale environmental heterogeneity.
Publications
Montiglio, P.-O., Garant, D.; Bergeron, P., Dubuc Messier, G., Réale, D. (2014). Pulsed resources
and the coupling between life-history strategies and exploration patterns in eastern chipmunks
(Tamias striatus). Journal of Animal Ecology 83 (3), pp. 720-728
Dubuc Messier, G., Garant D., Bergeron, P., Réale, D., (2012). Environmental conditions affect
spatial genetic structures and dispersal patterns in a solitary rodent. Molecular ecology 21 (21), pp. 5363-5373
Céline REISSER
Post-doctorante

CEFE/CNRS
Campus du CNRS
1919, route de Mende
34293 Montpellier 5
Tél : +33/0 4 67 61 32 20
Fax : +33/0 4 67 61 33 36
celine.reisser[at]cefe.cnrs.fr
Bref CV
2013- Postdoctoral fellow, CNRS CEFE UMR 5175, Montpellier, France
2012-13 Postdoctoral fellow, University of Fribourg, Fribourg, Switzerland
2008-12 PhD, Victoria University of Wellington, Wellington, New Zealand
2005-2007 MSc, University of California Santa Cruz, USAand Centre d’Oceanologie de Marseille, France
Thèmes de recherche
I am broadly interested in the evolution of breeding systems, sex determination/differentiation and reproduction. I am currently using Next Generation Sequencing technologies and bioinformatic tools to study the attributes of a neo sex determining genomic region in Daphnia magna. I am looking at differentiation, recombination patterns and gene content.
I am also working on differential gene expression in sexual phenotypes.
Publications
[5] CMO Reisser, JJ Bell, JPA Gardner (2014) Correlation between pelagic larval duration and realised dispersal : long-distance genetic connectivity between northern New Zealand and the Kermadec Islands archipelago. Marine Biology, 161 : 297-312.
[4] CMO Reisser, B Marshall, JPA Gardner (2012) A morphometric approach supporting genetic results in the taxonomy of the New Zealand limpets of the Cellana strigilis complex (Mollusca : Patellogastropoda : Nacellidae). Invertebrate Systematics, 26 : 193-203.
[3] CMO Reisser, JJ Bell, JPA Gardner (2012) Isolation and characterization of polymorphic microsatellite markers for the intertidal sea snail Nerita melanotragus E.A. Smith, 1884 (Powell 1979). Molecular Ecology Resources, 12 : 570-572.
[2] CMO Reisser, AR Wood, JJ Bell, JPA Gardner (2011) Connectivity, small islands and large distances : the Cellana strigilis limpet complex of the Southern Ocean. Molecular Ecology, 20 : 3399-3413.
[1] CMO Reisser, R Beldade, G Bernardi (2009) Multiple paternity and competition in sympatric congeneric reef fishes, Embiotoca jacksonii and E. lateralis. Molecular Ecology, 18 : 1505-1510.
Liens
Research Gate: www.researchgate.net/profile/Celine_Reisser
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